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PRE-CONFERENCE SHORT COURSES* For complete short course
agendas, see short course listing on program pages Tuesday,
February 2
*Separate Registration Required Morning Courses: 9am – 12pm (SC1) APPLYING NEXT GENERATION SEQUENCING TECHNOLOGIES TO RESEARCH Introduction to New Technologies and Application in Research
Course Moderator:
Dr. Ronald W. Davis, Professor, Biochemistry & Genetics and Director, Stanford Genome Technology Center, Stanford University
(SC2) ONE CASE STUDY IN BREAST CANCER-THREE PERSPECTIVES Illustrating Current Challenges in Personalized Medicine
Course Instructors: Michael Liebman, Ph.D., Managing Director, Strategic
Medicine, Inc. Laura J. Esserman, Professor, Surgery, University of
California, San Francisco Medical Center Tracey Colpitts, Ph.D., Manager, Abbott Molecular
(SC3) MIGHTY MITOCHONDRIA: THEIR RELEVANCE TO DISEASE AND TRANSLATIONAL MEDICINE Mitochondria in disease and drug induced toxicity (James Dykens)
Assessing mitochondrial function preclinically (Yvonne Will)
Non-invasive mitochondrial assessment in the clinic (Robert Wiseman)
Course Leader: (SC4) ADDRESSING SAFETY CONCERNS FOR BIOLOGICAL DRUGS
Course Instructors:
Hong Wang, Ph.D., DABT, Safety Assessment, Genentech Inc. (SC5) TARGETING CANCER STEM CELLS WITH BIOLOGICS
Course instructors: (SC6) DEALING WITH THE BLOOD-BRAIN BARRIER
Course Instructors: Christopher L. Shaffer, Ph.D., Associate Research Fellow, Pharmacokinetics, Dynamics & Metabolism, Pfizer, Inc. Douglas Spracklin, Ph.D., Director, Pharmacokinetics, Dynamics and Metabolism, Pfizer, Inc. Travis T. Wager, Ph.D. Associate Research Fellow, Neuroscience Discovery, Medicinal Chemistry, Pfizer, Inc. (SC7) BEST PRACTICES IN TRANSLATIONAL & PERSONALIZED MEDICINE
Course Instructors: Jeffrey S. Barrett, Ph.D., FCP, Pediatrics Director, Pediatric Pharmacology Research Unit, The Children’s Hospital of Philadelphia Lisa LaLuna, Senior Vice President, Corporate Development & Implementation, ePharmaSolutions Jeremy Packer, Head, Bioinformatics, Abbott Faye D. Schilkey, Associate Director, NM Sequencing Center, National Center for Genome Resources (SC8) STRATEGIES FOR MOLECULAR DIAGNOSTIC COMPANIES Achieving Success in Rapidly Changing Markets
Course Instructors: Keith F.
Batchelder, Chief Executive Officer, Genomic Healthcare Strategies (SC9) FRAGMENT-INSPIRED MEDICINAL CHEMISTRY
Course Instructors: Michelle Arkin, Ph.D., Associate Director, Biology, Small Molecule Discovery Center, PharmaceuticalChemistry, University of California, San Francisco Daniel A. Erlanson, Ph.D., Co-founder, Carmot Therapeutics, Inc. (SC10) TRANSPORTER-MEDIATED DRUG-DRUG INTERACTION POTENTIAL: STRATEGIES FOR IN VITRO CHARACTERIZATION
Course Instructors: Phil Burton, Ph.D., Chief Executive Officer & Chief Scientific Officer, ADMETRx, Inc. Xingrong Liu, Ph.D., Senior Scientist, DMPK, Genentech, Inc.
Class Materials Include: The Primer: A Biotechnology Guide for the Non-Scientists Course Instructor Karin Lucas, Ph.D., BioTech Primer Instructor and Scientific Advisor Karin Lucas, Ph.D., has been teaching with BioTech Primer, Inc. for the past five years. As a scientist at Biogen Idec she develops protein pharmaceuticals for the treatment of cancer and multiple sclerosis. Previously, Dr. Lucas was a scientist and project director at Cardinal Health where she worked on the development of over 25 products with multiple pharmaceutical and biotechnology companies. In addition to her laboratory role, she is also trained as a Lean Six Sigma greenbelt. Dr. Lucas is an active community volunteer and has served as the PR chair and later Vice President of the San Diego chapter of AWIS (Association for Women in Science). In 1998, Dr. Lucas was honored as the Cal Poly Physical Chemistry Student of the Year and in 2003 she was selected for the AWIS San Diego Rookie of the Year Award. Dr. Lucas received her B.S. in biochemistry from California Polytechnic State University, San Luis Obispo and went on to complete her Ph.D. in biochemistry at University of California San Diego. (SC12) DESIGNING RIGOROUS OMICS STUDIES FOR BIOMARKER DISCOVERY AND DEVELOPMENT OF PROGNOSTIC AND PREDICTIVE MOLECULAR DIAGNOSTICS Course Agenda 2:00 Experimental Design in Genomics, Proteomics and Metabolomics Terry Speed, Professor, Department of Statistics, University of California, Berkeley; Head, Bioinformatics, WEHI, Australia For most experiments in this area, we can recognize three main phases that are relevant to experimental design. I: choice and preparation of experimental material, choice of platform technology; II: assignment of experimental reagents to components of the technology; III: actual conduct of the experiment, including times, places and conditions of experiment, and protocols, reagents, operators and equipment used. In this talk we will mainly focus on examples where the experiments were poorly designed and led to unsatisfactory outcomes. This will show the need for good design 2:45 A Roadmap for Omics Study Design Juergen von Frese, Ph.D., Managing Director, Data Analysis Solutions DA-Sol GmbH, Germany Any biomarker or predictive or prognostic signature can only be as good as the data it was derived from. Study design critically determines the inherent signal (i.e. information) in the data. This talk will provide a systematic overview and roadmap for designing omics studies. This will range from defining study aims, determining sample size, randomization and reference measurements to an in-depth discussion of tackling confounding factors. Examples from cancer diagnostics will be given and crucial issues and pitfalls will be highlighted. 3:30 Refreshment Break 4:00 Beyond the Pilot Studies: FDA Perspectives on Biomarker Qualification Donna Roscoe, Ph.D., Senior Reviewer, FDA/OIVD/DIHD Major advances in research technology are allowing for the unprecedented identification of multiple genetic and protein biomarkers. The leap from characterizing these signatures to validating them for a specific use and applying them to patient diagnosis, screening, and therapeutic intervention is best accomplished with an understanding of the FDA regulatory process. This talk is intended to provide an overview of the current perspective of the Office of In Vitro Diagnostic Device Evaluation and Safety (OIVD) in the FDA's Center for Devices and Radiological Health (CDRH) on the issues related to assessing analytical and clinical performance of biomarker-based in vitro diagnostic assays for use in clinical practice or medical product development. 4:45 Q&A 5:00 End of Course |
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